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Old 07-08-2010, 03:42 AM   #1
nozzer
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Default insert sizes

Hi, could anyone recommend an optimal insert size for detecting structural rearrangements in PE reads? Should we go for a range of sizes?
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Old 07-09-2010, 06:49 AM   #2
flxlex
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This might help:

Designing deep sequencing experiments: detecting structural variation and estimating transcript abundance
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