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Thread Tools |
03-03-2011, 11:22 AM
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#1 |
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Member
Location: MN Join Date: Feb 2010
Posts: 18
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IGV: display six-frame (amino-acid) translation of reference genome?
In IGV, is it possible to display the six-frame (amino-acid) translation of the reference genome?
That would be helpful for assessing the accuracy of gene models. |
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03-03-2011, 12:38 PM
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#2 |
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Peter (Biopython etc)
Location: Dundee, Scotland, UK Join Date: Jul 2009
Posts: 1,543
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I don't know, but you can do it in Tablet.
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03-07-2011, 03:57 PM
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#3 |
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Member
Location: MN Join Date: Feb 2010
Posts: 18
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I contacted igv-help [at] broadinstitute.org . I got a reply saying that the six-frame translation will be available in the upcoming IGV 2.0 release, which you can access at http://www.broadinstitute.org/software/igv/wiki .
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| Tags |
| annotation, genome browser, igv |
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