Hi, anyone has an idea what causes this error?
Please, help!
Thanks in advance.
bfast localalign -f mature_converted.fa -m bfast.matches.s_1_1_sequence_clean.bmf > bfast.aligned.s_1_1_sequence_clean.baf
************************************************************
Checking input parameters supplied by the user ...
Validating fastaFileName mature_converted.fa.
Validating matchFileNamebfast.matches.s_1_1_sequence_clean.bmf.
**** Input arguments look good! *****
************************************************************
************************************************************
Printing Program Parameters:
programMode: [ExecuteProgram]
fastaFileName: mature_converted.fa
matchFileName: bfast.matches.s_1_1_sequence_clean.bmf
matchFileNameOne: [Not Using]
matchFileNameTwo: [Not Using]
scoringMatrixFileName: [Not Using]
ungapped: [Not Using]
unconstrained: [Not Using]
space: [NT Space]
startReadNum: 1
endReadNum: 2147483647
offsetLength: 20
maxNumMatches: 384
avgMismatchQuality: 10
numThreads: 1
queueLength: 10000
timing: [Not Using]
************************************************************
************************************************************
Reading in reference genome from mature_converted.fa.nt.brg.
In total read 17341 contigs for a total of 377003 bases
************************************************************
************************************************************
Reading match file from bfast.matches.s_1_1_sequence_clean.bmf.
************************************************************
Performing alignment...
Reads processed: 0bfast: RGMatches.c:91: RGMatchesRead: Assertion `m->readNameLength < 4028' failed.
Aborted
Please, help!
Thanks in advance.
bfast localalign -f mature_converted.fa -m bfast.matches.s_1_1_sequence_clean.bmf > bfast.aligned.s_1_1_sequence_clean.baf
************************************************************
Checking input parameters supplied by the user ...
Validating fastaFileName mature_converted.fa.
Validating matchFileNamebfast.matches.s_1_1_sequence_clean.bmf.
**** Input arguments look good! *****
************************************************************
************************************************************
Printing Program Parameters:
programMode: [ExecuteProgram]
fastaFileName: mature_converted.fa
matchFileName: bfast.matches.s_1_1_sequence_clean.bmf
matchFileNameOne: [Not Using]
matchFileNameTwo: [Not Using]
scoringMatrixFileName: [Not Using]
ungapped: [Not Using]
unconstrained: [Not Using]
space: [NT Space]
startReadNum: 1
endReadNum: 2147483647
offsetLength: 20
maxNumMatches: 384
avgMismatchQuality: 10
numThreads: 1
queueLength: 10000
timing: [Not Using]
************************************************************
************************************************************
Reading in reference genome from mature_converted.fa.nt.brg.
In total read 17341 contigs for a total of 377003 bases
************************************************************
************************************************************
Reading match file from bfast.matches.s_1_1_sequence_clean.bmf.
************************************************************
Performing alignment...
Reads processed: 0bfast: RGMatches.c:91: RGMatchesRead: Assertion `m->readNameLength < 4028' failed.
Aborted
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