Hi everybody,
sometimes I have samples, where every other quality parameter I can think of looks fine, but I have 20% or even more broken pairs i.e. mate pairs are mapped far away from each other. What might be the technincal or biological reason for this?
sometimes I have samples, where every other quality parameter I can think of looks fine, but I have 20% or even more broken pairs i.e. mate pairs are mapped far away from each other. What might be the technincal or biological reason for this?
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