I'm sure this is a very simple question, but I am still getting a feel for how locations are named.
Let's assume that I've processed an individual's genome (possibly from 1000 genomes) and I identified a consensus sequence for that individual.
I want to compare the sequencing calls to microarray calls for those SNPs on an array. How do I identify the positions in the sequencing that are located on the array?
Let's assume that I've processed an individual's genome (possibly from 1000 genomes) and I identified a consensus sequence for that individual.
I want to compare the sequencing calls to microarray calls for those SNPs on an array. How do I identify the positions in the sequencing that are located on the array?
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