SEQanswers

Go Back   SEQanswers > Bioinformatics > Bioinformatics



Similar Threads
Thread Thread Starter Forum Replies Last Post
iGenomes genes.gtf : One tss_id for multiple transcripts with different start coords tva Bioinformatics 1 03-12-2013 09:29 AM
Illumina iGenomes annotation problems mrfox Bioinformatics 2 04-19-2012 05:32 PM
Illumina iGenomes GTF Files Dario1984 Bioinformatics 6 03-22-2012 08:55 AM
iGenomes data set....which to use? hbt Bioinformatics 3 03-13-2012 05:17 AM
Illumina iGenomes Incomplete Data Files Dario1984 Bioinformatics 0 01-24-2012 04:00 PM

Reply
 
Thread Tools
Old 04-04-2013, 02:43 AM   #1
sidderb
Member
 
Location: Cambridge UK

Join Date: Aug 2011
Posts: 14
Default iGenomes update cycle?

Does anyone know if and when the Illumina iGenomes annotation sets (http://tophat.cbcb.umd.edu/igenomes.html) will be updated? I'm specifically interested in the rat genome which has a new build (v5) not covered by the current iGenomes set.

I am hoping to save myself the hassle of building it myself...
__________________
@sidderb
sidderb is offline   Reply With Quote
Old 04-05-2013, 08:13 AM   #2
Eric S
Junior Member
 
Location: San Diego

Join Date: Nov 2009
Posts: 2
Default

The iGenomes should be updated within the next few weeks. This will include updates to all annotation files, and it will include the latest rat build.
Eric S is offline   Reply With Quote
Reply

Tags
igenomes, rat, update

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off




All times are GMT -8. The time now is 11:33 AM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2020, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO