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Old 12-09-2010, 12:05 PM   #1
Fritz_Doll
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Location: North Dakota

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Default MAQ Map/Match Problem

I cannot get the map/match function to work. The test i ran was that I copied 5 sequences from the fasta file (that was used as the .bfa) and copied them into a quick file that was saved as a fasta then converted over to fastq then the .bfq, I tried running that but they aren't aligning. Any Ideas?
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Old 06-03-2012, 02:38 AM   #2
nanlandetian
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I`m sorry ,I`m a freshman in WGS ,and my English is poor,so what are the difference between map and match ,and how can we use -a and -A in map ,manual are ambiguous,anyone can give me some advices ,thanks advance!
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