Hi all,
Just a quick question for you: in Tophat's deletions.bed file, what does the last column in the file indicate? The tophat manual does not have much on this. Also, how is it possible that every single deletion in the file is only 1bp? Example is below:
Thank you all again for your help!
Just a quick question for you: in Tophat's deletions.bed file, what does the last column in the file indicate? The tophat manual does not have much on this. Also, how is it possible that every single deletion in the file is only 1bp? Example is below:
Code:
track name=deletions description="TopHat deletions" chr1 10185 10186 - 1 chr1 14828 14829 - 2 chr1 15879 15880 - 1 chr1 31719 31720 - 4 chr1 36351 36352 - 3 chr1 38728 38729 - 5 chr1 39751 39752 - 1 chr1 51864 51865 - 1 chr1 59253 59254 - 1
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