Hi,
I was trying to merge several files (each chr has separate file) into one big file. I gave the following command:
plink --noweb --bfile T2.chr1 --merge-list mylist.txt --make-bed --out T2
but get the following error:
ERROR: Cannot merge files. Check your MAP files.
mylist.txt contains:
T2.chr2.bed T2.chr2.bim T2.chr2.fam
T2.chr3.bed T2.chr3.bim T2.chr3.fam
T2.chr4.bed T2.chr4.bim T2.chr4.fam
.
.
All the individual .fam files appear to be identical (same file size).
What am I doing wrong?
thanks.
I was trying to merge several files (each chr has separate file) into one big file. I gave the following command:
plink --noweb --bfile T2.chr1 --merge-list mylist.txt --make-bed --out T2
but get the following error:
ERROR: Cannot merge files. Check your MAP files.
mylist.txt contains:
T2.chr2.bed T2.chr2.bim T2.chr2.fam
T2.chr3.bed T2.chr3.bim T2.chr3.fam
T2.chr4.bed T2.chr4.bim T2.chr4.fam
.
.
All the individual .fam files appear to be identical (same file size).
What am I doing wrong?
thanks.
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