Seqanswers Leaderboard Ad

Collapse

Announcement

Collapse
No announcement yet.
X
Collapse
 
  • Page of 1
  • Filter
  • Time
  • Show
Clear All
new posts
Previous template Next
  • #1

    SMRTanalysis (v.1.4.0) for CentOS - missing a FORTRAN library

    Install tarball for the CentOS install of SMRTanalysis on PacBio DevNet was missing (at least until yesterday) a required FORTRAN library (libgfortran.so.3).

    This was causing analyses submitted via the SMRTPortal front-end to fail. The error messages were not very helpful in identifying the problem (PacBio tech support helped determine the missing library).

    Hopefully the software on the PacBioDevNet will be amended to include the missing library going forward.

    In case someone else has been having a problem with SMRTPortal jobs (v.1.4.0) on CentOS, I wanted to document the solution.
    Last edited by GenoMax; 03-08-2013, 07:09 AM.
    Tags: 1.4.0, centos, smrtanalysis
  • #2
    On centos 5 you need to install gfortran44-devel package, the update to 1.4 requires fortran 4.4 not the standard 4.1

    Comment

    Previous template Next

    Latest Articles

    Collapse
    • seqadmin
      Recent Advances in Sequencing Analysis Tools
      by seqadmin


      The sequencing world is rapidly changing due to declining costs, enhanced accuracies, and the advent of newer, cutting-edge instruments. Equally important to these developments are improvements in sequencing analysis, a process that converts vast amounts of raw data into a comprehensible and meaningful form. This complex task requires expertise and the right analysis tools. In this article, we highlight the progress and innovation in sequencing analysis by reviewing several of the...
      05-06-2024, 07:48 AM
    • seqadmin
      Essential Discoveries and Tools in Epitranscriptomics
      by seqadmin




      The field of epigenetics has traditionally concentrated more on DNA and how changes like methylation and phosphorylation of histones impact gene expression and regulation. However, our increased understanding of RNA modifications and their importance in cellular processes has led to a rise in epitranscriptomics research. “Epitranscriptomics brings together the concepts of epigenetics and gene expression,” explained Adrien Leger, PhD, Principal Research Scientist...
      04-22-2024, 07:01 AM
    View All

    ad_right_rmr

    Collapse

    News

    Collapse
    Topics Statistics Last Post
    A Closer Look at the Enigmatic Genomes of Oikopleura dioica by seqadmin
    Started by seqadmin, Yesterday, 06:35 AM
    0 responses
    15 views
    0 likes
    		 Last Post seqadmin
    by seqadmin
    Yesterday, 06:35 AM  
    Advanced Epigenome Editing Platform Explores Gene Regulation Mechanisms by seqadmin
    Started by seqadmin, 05-09-2024, 02:46 PM
    0 responses
    21 views
    0 likes
    		 Last Post seqadmin
    by seqadmin
    05-09-2024, 02:46 PM  
    Telomere Maintenance by PARP1: A New Perspective in Cancer Research by seqadmin
    Started by seqadmin, 05-07-2024, 06:57 AM
    0 responses
    18 views
    0 likes
    		 Last Post seqadmin
    by seqadmin
    05-07-2024, 06:57 AM  
    Enhanced Neoantigen Detection: Introducing NeoHunter by seqadmin
    Started by seqadmin, 05-06-2024, 07:17 AM
    0 responses
    19 views
    0 likes
    		 Last Post seqadmin
    by seqadmin
    05-06-2024, 07:17 AM  
    View All
    Working...
    X