Hello, I am looking for a tool where I can submit a list of gene names and get back relevant publications for each gene. I remember hearing about such programs in passing, but can't seem to find one. I have tried using NCBI Batch Entrez with little luck. Thanks!!
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You can use Entrezdirect utilities to query Pubmed database.
Code:$ esearch -db pubmed -query "BRCA2 [GENE]" | esummary -format docsum | xtract -pattern DocumentSummary -element Title,FullJournalName,ELocationID Understanding Factors Associated with Uptake of BRCA1/2 Genetic Testing among Orthodox Jewish Women in the USA Using a Mixed-Methods Approach. Public health genomics doi: 10.1159/000499852 Novel Germline Mutations of BRCA1 and BRCA2 in Korean Familial Breast Cancer Patients. Chonnam medical journal doi: 10.4068/cmj.2019.55.2.99 Clinical characteristics and outcomes in elderly women with BRCA1 and BRCA2 mutations. Gynecologic oncology pii: S0090-8258(19)31261-2. doi: 10.1016/j.ygyno.2019.05.017
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