Go Back   SEQanswers > Jobs Forums > Academic/Non-Profit Jobs

Similar Threads
Thread Thread Starter Forum Replies Last Post
Senior Bioinformatics Analyst/Programmer at University of Rochester Medical Center acornwell Academic/Non-Profit Jobs 0 08-18-2015 11:32 AM
Bioinformatics Engineer @ MSK Cancer Center (NYC) nemitzk Academic/Non-Profit Jobs 0 08-23-2013 08:31 AM
Bioinformatics Programmer for Metagenomics Center - University of Oregon ndunn Academic/Non-Profit Jobs 0 04-09-2013 02:45 PM
Postdoc Position in Bioinformatics at Columbia University Medical Center c2b2 Academic/Non-Profit Jobs 0 07-23-2011 10:36 AM

Thread Tools
Old 09-02-2015, 06:30 PM   #1
Bioinformatics Scientist, UPMC
Location: Pittsburgh, PA

Join Date: Nov 2008
Posts: 4
Default Bioinformatics Engineer at University of Pittsburgh Medical Center

The Division of Molecular & Genomic Pathology at UPMC Presbyterian is seeking a full-time bioinformatics engineer to support next-generation sequencing for clinical testing. This position will assist in building and maintaining robust clinical systems for the processing of large-scale genomics data. Proficiency with Linux/Unix environments with some system administration experience is critical. Some software development experience would be preferred. Basic knowledge of molecular biology and genomics is preferred but not required. Examples of duties for which this position will be responsible include:
  • User interface development improve existing and create new user interfaces in Python/Django-based web applications, identify process improvements
  • Improve and manage software testing and error handling for Python/Django-based web applications
  • Assist in software deployment and improving deployment plans
  • Data storage administration design and implement automated backup solutions, monitor performance and free disk space, setup and optimize drive mounts for transferring large amounts of data
  • Troubleshoot NGS server hardware and software issues e.g. diagnose hardware failures and coordinate with lab technologists and service personnel to resolve them, troubleshoot firewall and network configuration issues

Technical requirements
  • Linux/Unix proficiency
  • Python scripting experience (application development preferred)
  • HTML/CSS and basic web development skills

  • Django
  • SQL
  • Javascript, JQuery
  • NGS data analysis experience
  • Shell scripting
  • Docker, containers, or virtualization experience

For more information and to apply with CV/resume, please contact More information about the Molecular & Genomic Pathology lab can be found at
kmcallenberg is offline   Reply With Quote

bioinformatics, clinical, job, linux, python

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off

All times are GMT -8. The time now is 12:32 AM.

Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2019, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO