Hi all,
HTSeq's count file output contains # of reads for
no_feature
ambiguous
too_low_aQual
not_aligned
alignment_not_unique
I used to delete them from my gene matrix before inputting that
to DESeq's newCountDataSet.
Is it okay to do it this way or have these 5 feature_id's in the data
matrix when performing DE analysis using DESeq
HTSeq's count file output contains # of reads for
no_feature
ambiguous
too_low_aQual
not_aligned
alignment_not_unique
I used to delete them from my gene matrix before inputting that
to DESeq's newCountDataSet.
Is it okay to do it this way or have these 5 feature_id's in the data
matrix when performing DE analysis using DESeq
Comment