Hi there,
I have a list of sequence id and I am trying to extract the sequences from the proteome of the organism using these ids. I used the grep command with -w and -f to find out the sequences and got some of the sequences. Further, I want to extract the remaining sequences of my list from uniprot. For this I am trying to identify the sequence ids from my listfile which I could not find in the proteome set. How can I do this using grep/awk/sed commands or any other oneliner?
Thanks
I have a list of sequence id and I am trying to extract the sequences from the proteome of the organism using these ids. I used the grep command with -w and -f to find out the sequences and got some of the sequences. Further, I want to extract the remaining sequences of my list from uniprot. For this I am trying to identify the sequence ids from my listfile which I could not find in the proteome set. How can I do this using grep/awk/sed commands or any other oneliner?
Thanks
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