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Old 06-01-2011, 11:33 AM   #1
slny
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Location: FL

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Default genome annotation question

Hi,

I have unknown genome sequences from de novo assembling. How could I annotate the sequence? Any free available software or tools I can use for genome wide annotation?

Thanks,
Slny
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Old 06-01-2011, 01:06 PM   #2
zhangju
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I am doing annotation for bacterial genomes with JGI IMG ER http://merced.jgi-psf.org/cgi-bin/im...ubmit/main.cgi

You may check it out.

Justin
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Old 06-01-2011, 01:35 PM   #3
polyatail
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There are several services.

IMG/ER, mentioned above

RAST
http://rast.nmpdr.org/

JCVI
http://www.jcvi.org/cms/research/pro...ation-service/
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Old 06-01-2011, 08:26 PM   #4
slny
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Thanks a lot for the responses. It's very helpful.
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