I was trying to use findpeaks on eland results using the 'separateelandsortedreads.jar' and it pointed out -ve coordinate mapped reads
Anyone else seen this? What would it mean, as I never expected negative alignment coordinates
Code:
R0174892 2 115 1669 54 GGTGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTGGGTTAG ggggggggWagegggfffffbfbe_ffafeffbfffffffefbeffff`b chr16.fa -10 R 3C35NNNNNNNNNNN 7
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