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  • How to run SIFT in Linux?

    Hi, I installed SIFT software in Linux (http://sift.jcvi.org/), but I don’t know how to run (command lines) and how should be the input file for non human genomes (thousands of SNPs).

    I did not find any information.

    I know that I need a file with the protein sequences, but the substitutions should be in the same file with the coordinates?

    thanks
    C

  • #2
    download the code and the database from the sift website and follow the instructions in the readme... i guess its pretty straight forward.. lemme knw if u have any specific doubt in that...
    Last edited by ersgupta; 07-22-2012, 07:30 AM.

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