SOAP3 is developed by one of the best groups on pattern matching, compressed index etc. It is published:
Nonetheless, it has not really addressed the question of accuracy as it does not talk about paired reads and gapped alignment. I have not tried by myself. I could not find a right machine. So, I do not know.
BGI has very good reasons to take on GPU, but I am not sure if CPU computing is ready for general users.
Nonetheless, it has not really addressed the question of accuracy as it does not talk about paired reads and gapped alignment. I have not tried by myself. I could not find a right machine. So, I do not know.
BGI has very good reasons to take on GPU, but I am not sure if CPU computing is ready for general users.
Comment