Hi everyone,
I would like to extract a single sequence corresponding to an OTU obtained in the analysis of the 454 pyrosequence.
Exemple:
I have found by RDP pyrosequencing analysis than an 40% of the reads are a specific genera. I would like to obtain the SEQUENCE of this genera to compare it with other sequences from genbank.
Maybe is easy, but I cannot manage it so far.
More info: I used for the analysis MOTHUR and RDP.
Thank you,
I would like to extract a single sequence corresponding to an OTU obtained in the analysis of the 454 pyrosequence.
Exemple:
I have found by RDP pyrosequencing analysis than an 40% of the reads are a specific genera. I would like to obtain the SEQUENCE of this genera to compare it with other sequences from genbank.
Maybe is easy, but I cannot manage it so far.
More info: I used for the analysis MOTHUR and RDP.
Thank you,
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