Installing GS FLX v2.6 in Ubuntu?

MissChristine · 07-20-2011, 10:41 AM

Hello all,

I was hoping someone might be able to walk me through the installation process for the GS FLX software v2.6; I am running Ubuntu 11.04.

The installation bulletin says to first install the DataProcessing_2.6.tgz package, followed by the DataAnalysis_2.6.tgz package, but I didn't get very far...

After extracting the first file, and launching the installer "setup.sh", the terminal shows:

sh: /sbin/lspci: not found

and I get an error message popping up that says "Error: Could not execute command: type rocks 2>&1"

Any suggestions? Thank you so much!

natstreet · 07-20-2011, 11:55 AM

I installed it in Ubuntu using the provided setup.sh script by doing this

Code:

sudo ln -s /bin/true /bin/rocks
sudo ./setup.sh

It then seems to be working fine.

shandley · 07-20-2011, 08:32 PM

See this thread: http://seqanswers.com/forums/showthread.php?t=8944

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07-20-2011, 10:41 AM	#1
MissChristine Junior Member Location: Hamilton, Canada Join Date: Jul 2011 Posts: 1	Installing GS FLX v2.6 in Ubuntu? Hello all, I was hoping someone might be able to walk me through the installation process for the GS FLX software v2.6; I am running Ubuntu 11.04. The installation bulletin says to first install the DataProcessing_2.6.tgz package, followed by the DataAnalysis_2.6.tgz package, but I didn't get very far... After extracting the first file, and launching the installer "setup.sh", the terminal shows: sh: /sbin/lspci: not found and I get an error message popping up that says "Error: Could not execute command: type rocks 2>&1" Any suggestions? Thank you so much!

07-20-2011, 11:55 AM	#2
natstreet Member Location: Sweden Join Date: Nov 2009 Posts: 83	I installed it in Ubuntu using the provided setup.sh script by doing this Code: sudo ln -s /bin/true /bin/rocks sudo ./setup.sh It then seems to be working fine.

07-20-2011, 08:32 PM	#3
shandley Member Location: Saint Louis, MO Join Date: Sep 2010 Posts: 58	See this thread: http://seqanswers.com/forums/showthread.php?t=8944