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Old 06-29-2014, 02:34 AM   #1
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Location: Israel

Join Date: Feb 2014
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Default Identification of Structural Variations tool

Dear all,
I'm looking for a tool for Identification of Structural Variations in exome sequencing.
Can you recommend me a friendly and reliable tool for linux?
Thank you for your help.
Sivanger is offline   Reply With Quote
Old 06-30-2014, 02:23 AM   #2
Location: Australia

Join Date: Mar 2013
Posts: 26

Originally Posted by Sivanger View Post
Identification of Structural Variations in exome sequencing.
What sort of structural variations are you hoping to detect? Small indels within exons as well as retrocopied genes are detectable in exome sequencing data but the vast majority of structural variation occurs outside of regions targeted by exome sequencing and is not able to be detected no matter what tool/software is used.
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