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Old 07-06-2012, 08:48 AM   #1
wzhang1001
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Location: USA

Join Date: Feb 2012
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Default GATK for Complete Genomics Exome sequecning data

Hello.

I have BAM files from Complete Genomics whole exome sequencing platform. Does anyone know what is the best tool(s)/workflow for variant calling using complete genomics BAM files?

Thanks in advance!
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