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Old 04-29-2016, 04:16 AM   #1
narty
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Location: Germany

Join Date: Apr 2016
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Default poly(A) and total RNA from the same sample?

Dear everybody,

I am looking for RNASeq data, ideally from a human cell culture, less ideally from a primary tissue, with the requirement that the data should be from a poly(A) selection but also from the total RNA of the very same input RNA. So basically a pair of data sets generated from the same sample. The platform isn't really important but the read length should be >50 bp.

Is anybody aware of such datasets?

thanks for any suggestion.

Best,
narty
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Old 04-29-2016, 05:38 AM   #2
Michael.Ante
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Hi Narty,

Did you have a look at the ABRF Study (here)? It does not contain total RNA, but depleted and degraded samples of the same cell cultures (UHRR).

Cheers,
Michael
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Old 05-02-2016, 12:22 AM   #3
narty
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thanks!
further suggestions are still welcome!

have a nice day,
narty
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