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Old 11-29-2010, 03:29 AM   #1
Location: India

Join Date: Nov 2010
Posts: 17
Default bowtie mapping stats

How to print bowtie stats in a file??

I want to print this output( bowtie mapping stats) in a file...

Time loading forward index: 00:00:00
Time loading mirror index: 00:00:00
Seeded quality full-index search: 00:00:00
# reads processed: 1000
# reads with at least one reported alignment: 699 (69.90%)
# reads that failed to align: 301 (30.10%)
Reported 699 alignments to 1 output stream(s)
Time searching: 00:00:00
Overall time: 00:00:00
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Old 11-29-2010, 06:22 AM   #2
Location: US

Join Date: Oct 2010
Posts: 50

bowtie .... >> file.log 2>&1
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