Hello,
I have a transcriptome assembly, and would like to just very quickly annotate the transcripts - it doesn't have to be that good as this is just a first pass.
Can someone point me to a software where I can just simply specify my assembly (which is just a fasta file) and it will try and annotate each transcript based on some databases.
I have done a search (e.g Ensembl's genebuild) but I can't seem to find a simple 'plug and play, one-stop' program - or am I simplifying the process too much?
Thanks,
I have a transcriptome assembly, and would like to just very quickly annotate the transcripts - it doesn't have to be that good as this is just a first pass.
Can someone point me to a software where I can just simply specify my assembly (which is just a fasta file) and it will try and annotate each transcript based on some databases.
I have done a search (e.g Ensembl's genebuild) but I can't seem to find a simple 'plug and play, one-stop' program - or am I simplifying the process too much?
Thanks,
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