Dear all,
I have problem to understand the settings "-v" and "-M" of soap.
Is somebody can help me to understand these options?
For example, what I don't understand:
1-Why do I get reads rwith missmatch using the setting "-v0"?
2-Why do I get only the reads with 1 missmatch using the setting "-M1"? I thought that I should get reads containing 0 or 1 missmatch...
Thank you in advance.
I have problem to understand the settings "-v" and "-M" of soap.
Is somebody can help me to understand these options?
For example, what I don't understand:
1-Why do I get reads rwith missmatch using the setting "-v0"?
2-Why do I get only the reads with 1 missmatch using the setting "-M1"? I thought that I should get reads containing 0 or 1 missmatch...
Thank you in advance.