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Old 07-20-2017, 11:22 AM   #1
jmartin
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Location: St. Louis

Join Date: Dec 2009
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Default Suggestions for metagenomic gene calling

I have a collection of large metagenomic samples from human stool and I want to characters the gene content per sample. What kinds of tools are available, and what are the best practices? Do you typically gene call on the metagenomic pool of reads per sample? Or do you gene call on metagenomic assembly contigs? Any advice would be appreciated.

Thanks,
John Martin
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