SEQanswers

Go Back   SEQanswers > Sequencing Technologies/Companies > Illumina/Solexa



Similar Threads
Thread Thread Starter Forum Replies Last Post
BLAST+ creating custom blast database and using blast+ filtering features deniz Bioinformatics 3 07-07-2019 08:04 AM
How to align diploid ab1 files to the reference genome? ymc Bioinformatics 2 06-29-2012 07:38 PM
How to represent reference and observed alleles in BED files for variants on negative LauraSmith Bioinformatics 0 02-17-2012 12:47 PM
How to combine two Reference Genome (Files)? byou678 Bioinformatics 0 10-11-2011 07:13 AM
creating Roche's sff files enna80 Bioinformatics 5 11-10-2010 05:30 AM

Reply
 
Thread Tools
Old 09-27-2012, 09:10 AM   #1
ngseq
Member
 
Location: Philadelphia, PA

Join Date: Mar 2010
Posts: 19
Default Creating custom reference genome from BED files?

Hi everyone,

I am wondering whether anyone has the experience of creating a custom reference genome from BED files. I hope to try MiSeq reporter for variant calling for a targeted sequence project but don't know how to enter our regions of interest as the custom reference genome. Any experience would be greatly appreciated.

Thanks!
ngseq is offline   Reply With Quote
Reply

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off




All times are GMT -8. The time now is 09:55 AM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2020, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO