Dear All
We have a project to identify the different bacteria strains and also want to find the genome different between different strains by WGS method.
The bacteria genome is ~2-3M.
So how many reads or depth I will need?
Do you have any recommended software/pipeline to do this?
Thank you so much.
We have a project to identify the different bacteria strains and also want to find the genome different between different strains by WGS method.
The bacteria genome is ~2-3M.
So how many reads or depth I will need?
Do you have any recommended software/pipeline to do this?
Thank you so much.
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