Dear All
I download some fastq reads from SRA, but the format is wired. The reads are all number and dots.
Please give me some pointers if you have seen this before? Thank you in advance.
example:
I download some fastq reads from SRA, but the format is wired. The reads are all number and dots.
Please give me some pointers if you have seen this before? Thank you in advance.
example:
Code:
@SRR1175538.1 1_11_419_F5-RNA length=35 G.12.1.21.2.20.1.3013..321..20233033 +SRR1175538.1 1_11_419_F5-RNA length=35 !!@@!@!@@!@!@@!@!@@@@!!@@@!!@@@?4<@/ @SRR1175538.2 1_12_62_F5-RNA length=35 G.02.0.01.2301.1.1222.1333.111102223 +SRR1175538.2 1_12_62_F5-RNA length=35 !!@@!@!@@!@@@=!@!@@@@!@@2@!@?>?@@@@@ @SRR1175538.3 1_12_580_F5-RNA length=35 G.10.0.13.0032.2.3123.1121.022330003 +SRR1175538.3 1_12_580_F5-RNA length=35 !!<@!@!@?!@@@8!@!@2@@!@;@@!@;@@@2@@@ @SRR1175538.4 1_12_1917_F5-RNA length=35 G.00.2.12.3.10.1.1133.2333.100133010 +SRR1175538.4 1_12_1917_F5-RNA length=35 !!@@!@!@@!@!@@!@!@@@@!@@?@!@@@@@@@@@ @SRR1175538.5 1_13_1110_F5-RNA length=35 G132.2120.22320023122.3200.320102100 +SRR1175538.5 1_13_1110_F5-RNA length=35 !@@@!@?@A!5=833052/3-!@?.2!@-55/@6.? @SRR1175538.6 1_13_1767_F5-RNA length=35 G002.3231.03320230131.1020.131301132 +SRR1175538.6 1_13_1767_F5-RNA length=35 !@@@!@@8@!@@//76*?<0@!@20@!@62/@@=-? @SRR1175538.7 1_14_646_F5-RNA length=35 G232.1032.21300133222.2022.233022033 +SRR1175538.7 1_14_646_F5-RNA length=35 !@@@!@@@@!@@@@<@@@@@@!@@@/!@@;@@@/=@ @SRR1175538.8 1_15_1325_F5-RNA length=35 G331.2201.30111132130.0011.202011230 +SRR1175538.8 1_15_1325_F5-RNA length=35 !@@=!@*@@!@@@@@@@@@@>!@@@@!@@@?@@@?@ @SRR1175538.9 1_15_1850_F5-RNA length=35 G110.3000.03303201101.1013.001113220 +SRR1175538.9 1_15_1850_F5-RNA length=35 !:@0!9:@*!=2;.6/[email protected]!@*0:!@*.@;@.3:
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