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Old 09-02-2015, 10:40 PM   #1
vipul jain
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Location: Nashik

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Default COSMIC vcf file contains "N" & "." characters in ALT column

Hi,

I am using COSMIC hg19 vcf file to make hotspot bed file but in ALT column of COSMIC vcf contains "N" & "." characters so software i am using ignores that COSMIC ID while making hotspot bed file. It will be great if anybody could help me.
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Old 09-03-2015, 12:16 AM   #2
lindenb
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cross posted: https://www.biostars.org/p/103846/#156651
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