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07-10-2012, 11:19 PM
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#1 |
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Junior Member
Location: tumkur Join Date: Jul 2012
Posts: 4
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denovo assembly
explanation about denovo asembly
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07-10-2012, 11:30 PM
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#2 |
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Junior Member
Location: india Join Date: Jul 2012
Posts: 4
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Assembling short reads to create full-length sequences . de-novo assemblies are orders of magnitude slower and more memory intensive than mapping assemblies.
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07-11-2012, 02:08 AM
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#3 |
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Peter (Biopython etc)
Location: Dundee, Scotland, UK Join Date: Jul 2009
Posts: 1,543
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de novo is Latin, basically meaning "from new". So a de novo assembly is without knowing anything about the answer - compared to a reference guided assembly where you have a simple genome for guidance.
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07-11-2012, 06:29 AM
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#4 |
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Senior Member
Location: Kansas City Join Date: Mar 2008
Posts: 197
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I love that such an incomplete question (phrase) got two thoughtful responses.
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07-11-2012, 07:08 AM
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#5 | |
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Senior Member
Location: East Coast USA Join Date: Feb 2008
Posts: 7,080
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His/her ISP may be charging by the word to access the internet
 Three posts (so far) by that user have less than 5 words each. Quote:
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07-11-2012, 07:13 AM
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#6 |
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Senior Member
Location: Kansas City Join Date: Mar 2008
Posts: 197
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Ha ha, good call.
On biostars, somebody would have deleted or closed it. I suppose there's a place for both approaches. |
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