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Old 07-17-2015, 09:37 AM   #1
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Post Calculating dN/dS with NGS data


I have DNA reads mapped in the genome reference in the format .SAM, i need to calculate dN/dS in each ORF.
How can I calculate this?
Someone suggests a script or software?
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Old 08-03-2015, 09:39 AM   #2
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You need ORFs of the same gene from many different species to calculate dN/dS
ymc is offline   Reply With Quote

non-synonymous, snp, substitution, synonymous

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