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07-17-2015, 09:37 AM
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#1 |
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Junior Member
Location: Brazil Join Date: Apr 2015
Posts: 5
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Calculating dN/dS with NGS data
Hello,
I have DNA reads mapped in the genome reference in the format .SAM, i need to calculate dN/dS in each ORF. How can I calculate this? Someone suggests a script or software? |
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08-03-2015, 09:39 AM
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#2 |
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Senior Member
Location: Hong Kong Join Date: Mar 2010
Posts: 498
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You need ORFs of the same gene from many different species to calculate dN/dS
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| Tags |
| non-synonymous, snp, substitution, synonymous |
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