SEQanswers

Go Back   SEQanswers > Bioinformatics > Bioinformatics



Similar Threads
Thread Thread Starter Forum Replies Last Post
PacBio Library Prep workshop and PacBio SMART-Portal bootcamp - UC Davis - April 2015 DNATECH Events / Conferences 1 04-02-2015 08:33 AM
Pacbio scaffolding AdrianP Pacific Biosciences 21 03-30-2015 09:09 AM
Error correction on PacBio with illumina and 454 lucio89 Pacific Biosciences 0 10-03-2014 04:13 PM
PacBio tutorials samanta General 1 06-28-2013 09:46 AM
Pacbio RS output juckdnarocks Pacific Biosciences 6 03-18-2013 01:12 AM

Reply
 
Thread Tools
Old 01-04-2016, 07:16 AM   #1
zhanghao
Member
 
Location: BEIJING

Join Date: Nov 2015
Posts: 17
Default How to assemible pacbio and 454 contif?

I have sequenced a bacteral using 454 and now get many 454 contig (format is xxxx.phd.1). Now I use pacbio to sequence it again. I want to assemble them together. I do not have the 454 raw data and just have the assembled contigs. So I do not think Celera Assembler (CA) can do it. How should I do? Which software should I use?

Thank You!!!
zhanghao is offline   Reply With Quote
Reply

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off




All times are GMT -8. The time now is 12:52 AM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2019, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO