Go Back   SEQanswers > Applications Forums > RNA Sequencing

Similar Threads
Thread Thread Starter Forum Replies Last Post
miR seperation swarner Sample Prep / Library Generation 2 07-25-2011 05:58 AM
Hello fellow miR Sequencers!!! Kaisee Introductions 0 10-28-2010 12:46 PM
Viewing sense and antisense alignment separately uqdbarr1 Bioinformatics 0 06-07-2010 07:17 PM
How to analyze miRNA, antisense RNA, new regulon, etc. by RNA sequencing jiwu2573 RNA Sequencing 2 12-14-2009 05:51 AM
PubMed: Identification of differentially expressed sense and antisense transcript pai Newsbot! Literature Watch 0 07-21-2009 05:00 AM

Thread Tools
Old 10-21-2009, 06:27 AM   #1
Location: US

Join Date: Jun 2009
Posts: 16
Default miR sequencing: miR and miR*, sense and antisense

I was wondering what people are doing with their miRNA data to quantitate
miR and miR* from their sequence reads (SOLID in my case).Especially novel miR*.
(I wish they change miR* nomenclature to more sensible 3p-5p one)
Is anybody aware of any computational approaches to automate miR vs miR*
quantitation? Also I was wondering how people are addressing sense - antisense
mapping issues related to ds regions in pre-miRs?
das is offline   Reply With Quote

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off

All times are GMT -8. The time now is 04:34 PM.

Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2019, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO