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Old 08-19-2009, 09:44 AM   #1
tim
Junior Member
 
Location: Norway

Join Date: Aug 2009
Posts: 8
Default Alternative to casava for variation analysis in RNA?

Hi,

Newbie question here. I was wondering whether anyone new of an
alternative to CASAVA for analysis of RNA sequencing. I have had a
look at the list of software over at http://seqanswers.com/forums/showthr...light=software
in the RNA section, but these do not seem to be aimed at variation
analysis in RNA data. If anyone could just point me in the right
direction, it would be much appreciated.

Tim
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