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Old 04-02-2010, 11:29 PM   #1
rbm_rk
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Location: Bhopal,India

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Default Velvet -output format

Dear friends,

I have recently started using velvet. On running velveth i get two files Roadmap and Sequences. Can anybody tell me what the internal structure of these file format means, especially the Roadmap file where you get the output:
ROADMAP 301
45 12 6 8
-1 12 0 -1
-1 12 0 -1

Thanks in advance

Ratnesh
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Old 07-28-2010, 09:36 AM   #2
Awesome
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Default

I would also like to know this.

And also, if anyone could tell me how to run velvet on illumina's paired-end bustard qseq.txt files that would be great.

Last edited by Awesome; 07-28-2010 at 10:09 AM.
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