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Old 05-03-2013, 12:09 AM   #1
hard998
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Location: beijing

Join Date: Jun 2009
Posts: 4
Smile ContigScape for visual interactive gap closure

Dear all,

We developed a Cytoscape plugin called ContigScape for you to resolve possible relationship between contigs from 454 or mate-paired sequencing. The program is easy to use and highly interactive. If you are looking for programs for a guidance in gap closure using Sanger sequencing, please try ContigScape. Here is the screenshot.

And here is the publication: Tang B, et al. ContigScape: a Cytoscape plugin facilitating microbial genome gap closing. BMC Genomics. 2013 Apr 30;14(1):289. PMID: 23627759. You can find the program from Cytoscape plugin manager or our app homepage: http://apps.cytoscape.org/apps/contigscape. We'd be glad to hear any suggestions from you.

Regards,

Qi Wang
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Old 10-15-2013, 03:36 AM   #2
paraslonic
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Location: Moscow

Join Date: Apr 2012
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Default can`t make it look like in screenshoots

Sample1 doesn`t help. It doesn`t show contigs as something solid...
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