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Old 04-15-2010, 01:36 PM   #1
Zimbobo
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Location: US

Join Date: Mar 2010
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Default velvet assembler contigs into gbrowse

Hello there,

at the moment I put contigs generated via the velvet/ABySS assembler into gbrowse by blasting them against a reference genome and then producing a gff3 file from the blast output.

I was wondering whether there is a better way to go about this. What are other people doing?

Thanks in advance for suggestions.
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