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Old 06-17-2015, 01:48 AM   #1
Location: cambridge, ma

Join Date: Apr 2011
Posts: 13
Default EXCAVATOR Error: sort(abs(diff(genomdat)))[1:n.keep]


I am using EXCAVATOR and I keep getting this error. I would appreciate any insights.

Read 24 items
Error in sort(abs(diff(genomdat)))[1:n.keep] :
only 0's may be mixed with negative subscripts
Calls: rbind -> filterOut -> trimmed.variance
Execution halted
Error in file(file, "rt") : cannot open the connection
Calls: read.table -> file
In addition: Warning message:
In file(file, "rt") :
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excavator - cnv analysis

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