SEQanswers

Go Back   SEQanswers > Sequencing Technologies/Companies > Illumina/Solexa



Similar Threads
Thread Thread Starter Forum Replies Last Post
SHRiMP and SOLiD Qualities agc SOLiD 5 03-18-2013 01:59 PM
Understanding Maq log output anna_vt Bioinformatics 1 10-17-2011 07:48 PM
Qualities in pileup disagree with qualities in fastq swbarnes2 Bioinformatics 10 01-13-2011 03:12 PM
1k genomes .bam qualities keebs42 Bioinformatics 2 04-27-2010 08:18 AM
Converting ABI colorspace qualities into base qualities szilva Bioinformatics 7 04-01-2010 11:38 PM

Reply
 
Thread Tools
Old 11-05-2008, 01:30 AM   #1
binnaz
Junior Member
 
Location: oxford

Join Date: Nov 2008
Posts: 1
Default Understanding Qualities using MAQ

does anyone have a list of the different Qualities generated by MAQ and what are their meanings? For example what is the difference between a calibrated Quality and a mapping Quality?
binnaz is offline   Reply With Quote
Old 11-06-2008, 01:41 AM   #2
cgjkjk
Member
 
Location: Roskilde

Join Date: Oct 2008
Posts: 14
Default

http://maq.sourceforge.net/qual.shtml
This link may help you.
cgjkjk is offline   Reply With Quote
Reply

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off




All times are GMT -8. The time now is 08:51 AM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2020, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO