Hey guys,
Recently, I want to try the mRNA-to-genomic alignment. I knew the software Spidey and Splign could do this. But these programs just only accept a single genomic sequence at a time, but not a genome fasta file containing multiple assemblies. I want to align multiple mRNA to multiple assemblies. What software can be used to do this? Thanks!
Recently, I want to try the mRNA-to-genomic alignment. I knew the software Spidey and Splign could do this. But these programs just only accept a single genomic sequence at a time, but not a genome fasta file containing multiple assemblies. I want to align multiple mRNA to multiple assemblies. What software can be used to do this? Thanks!
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