Hello all,
I have genome assemblies for two closely related species, one of which is much more complete than the other (and which I did not assemble). I am trying to improve my assembly using the information from the other assembly, but can't seem to find any programs that do this. I assembled contigs using abyss, and then improved the assembly using SSPACE. There is still a lot of room for improvement with the information from the other assembly.
Recommendations?
Thanks!
I have genome assemblies for two closely related species, one of which is much more complete than the other (and which I did not assemble). I am trying to improve my assembly using the information from the other assembly, but can't seem to find any programs that do this. I assembled contigs using abyss, and then improved the assembly using SSPACE. There is still a lot of room for improvement with the information from the other assembly.
Recommendations?
Thanks!
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