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Old 01-02-2010, 06:50 AM   #1
tsucheta
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Location: Arlington, TX

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Default New reference for IGV?

Hi broadIT,

I would very much like to use IGV from Broad, but only shortcoming I have is our reference genome is not listed there. Looks like I have to ask them to integrate the GTF files of our reference for us to use. Please let me know if this is not the case. I was playing around with IGV and this is what I understood while playing around with various options.

Thanks

Sucheta
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Old 01-02-2010, 06:52 AM   #2
ECO
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Quote:
Originally Posted by tsucheta View Post
Hi broadIT,

I would very much like to use IGV from Broad, but only shortcoming I have is our reference genome is not listed there. Looks like I have to ask them to integrate the GTF files of our reference for us to use. Please let me know if this is not the case. I was playing around with IGV and this is what I understood while playing around with various options.

Thanks

Sucheta
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