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  • InterProScan installtion problem

    I am having errors during installation of interproscan,

    WARNING: Some problems occured when trying to index the data files.
    Please fix the error below and index your datafiles using the /home/orf/iprscan/bin/index_data.pl script.
    For help, type './index_data.pl -h'
    errormsg: Warning !! : File /home/orf/iprscan/data/smart.desc does not exist, skipping (you may want to check your installation)!
    errormsg: Warning !! : File /home/orf/iprscan/data/smart.overlaps does not exist, skipping (you may want to check your installation)!
    errormsg: ERROR: /home/orf/iprscan/data/match_complete.xml checkIndex: /home/orf/iprscan/data/match_complete.xml.inx index out of date? at /home/orf/iprscan/bin/index_data.pl line 294.

    If any one know the solution pls guide me.

  • #2
    The smart files are proprietary software, so are not included in the package download. You will have to install them separately, then modify the file name "THRESHOLDS" to "smart.thresholds" and "DESCRIPTIONS" to "smart.desc" and put them in your data directory. More information can be found on the interpro FAQ and installation documents.

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