Hi,
Does anyone has problem with scaffolding using velvet? The contigs I generated are small and do not contain Ns.
I'm sure I follow the manual:
-First I merge the paired end reads using shufflesequences.pl
-./velveth for shortPaired
-./velvetg for paired-ends by giving insert size and expected coverage
What went wrong?
Does anyone has problem with scaffolding using velvet? The contigs I generated are small and do not contain Ns.
I'm sure I follow the manual:
-First I merge the paired end reads using shufflesequences.pl
-./velveth for shortPaired
-./velvetg for paired-ends by giving insert size and expected coverage
What went wrong?
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