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Old 06-07-2015, 11:22 PM   #1
AntonioRFranco
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Location: Cordoba, Spain

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Posts: 21
Default Problems compiling MCScanX

This is a nice program to look for synteny.
You download the program, do a simple make, and theoretically, you get the executable bin

But I am facing problems, maybe because I have a 64bit Ubuntu system

After running make, I get the following
Code:
" msa.cc: In function ‘void msa_main(const char*)’:
msa.cc:289:22: error: ‘chdir’ was not declared in this scope
if (chdir(html_fn)<0)
^
make: *** [mcscanx] Error 1" 
"""
May I get help from any of you ?
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Old 06-08-2015, 01:07 AM   #2
GenoMax
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Default

This thread will help. See post #6 for the solution: http://ubuntuforums.org/showthread.php?t=2205151
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Old 06-08-2015, 02:03 AM   #3
AntonioRFranco
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Default

Thank you. It works..
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