Hello,
I'm new to both the site and analysis of NGS data. I'm currently working on analyzing multiplexed RADseq data (Illumina hi-seq) for population genetics of Arabidopsis thaliana (highly selfing diploid). I'd be particularly interested in any advice on settings for filtering variant calls using samtools.
Chris
I'm new to both the site and analysis of NGS data. I'm currently working on analyzing multiplexed RADseq data (Illumina hi-seq) for population genetics of Arabidopsis thaliana (highly selfing diploid). I'd be particularly interested in any advice on settings for filtering variant calls using samtools.
Chris