Hi, I've compared two conditions in cuffdiff (2 reps each). On examining the output, I see in the gene_exp.diff file that some of the XLOC features show 'NOTEST' under the status column, and '-inf' under the log2(fold change) column.
I've never seen this before, and it's worrying me as it produces weird plots in cummeRbund...
Any help would be great!
Best,
N
I've never seen this before, and it's worrying me as it produces weird plots in cummeRbund...
Any help would be great!
Best,
N
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