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Old 07-15-2011, 10:19 AM   #1
pmiguel
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Location: Purdue University, West Lafayette, Indiana

Join Date: Aug 2008
Posts: 2,317
Default GS-FLX (454) v2.6 software can output .bam

At long last...

Just did a mapping with gsMapper and the resulting .bam file is easily indexable with samtools and loaded right into IGV. Rational cigar strings instead of the crazy things one gets with the work-around amos tools method.

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Phillip
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